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RTopper

This package is designed to perform Gene Set Analysis across multiple genomic platforms


Bioconductor version: Release (3.18)

the RTopper package is designed to perform and integrate gene set enrichment results across multiple genomic platforms.

Author: Luigi Marchionni <marchion at jhu.edu>, Svitlana Tyekucheva <svitlana at jimmy.harvard.edu>

Maintainer: Luigi Marchionni <marchion at jhu.edu>

Citation (from within R, enter citation("RTopper")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RTopper")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RTopper")
RTopper user's manual PDF R Script
Reference Manual PDF
LICENSE Text

Details

biocViews Microarray, Software
Version 1.48.0
In Bioconductor since BioC 2.9 (R-2.14) (12.5 years)
License GPL (>= 3) + file LICENSE
Depends R (>= 2.12.0), Biobase
Imports limma, multtest
System Requirements
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Suggests org.Hs.eg.db, KEGGREST, GO.db
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RTopper_1.48.0.tar.gz
Windows Binary RTopper_1.48.0.zip
macOS Binary (x86_64) RTopper_1.48.0.tgz
macOS Binary (arm64) RTopper_1.48.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RTopper
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RTopper
Bioc Package Browser https://code.bioconductor.org/browse/RTopper/
Package Short Url https://bioconductor.org/packages/RTopper/
Package Downloads Report Download Stats