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biodbLipidmaps

biodbLipidmaps, a library for connecting to the Lipidmaps Structure database


Bioconductor version: Release (3.18)

The biodbLipidmaps library provides access to the Lipidmaps Structure Database, using biodb package framework. It allows to retrieve entries by their accession number, and run web the services lmsdSearch and lmsdRecord.

Author: Pierrick Roger [aut, cre]

Maintainer: Pierrick Roger <pierrick.roger at cea.fr>

Citation (from within R, enter citation("biodbLipidmaps")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("biodbLipidmaps")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("biodbLipidmaps")
An introduction to biodbLipidmaps HTML R Script
Reference Manual PDF
NEWS Text

Details

biocViews DataImport, Infrastructure, Software
Version 1.8.0
In Bioconductor since BioC 3.14 (R-4.1) (2.5 years)
License AGPL-3
Depends R (>= 4.1)
Imports biodb(>= 1.3.2), lifecycle, R6
System Requirements
URL https://github.com/pkrog/biodbLipidmaps
Bug Reports https://github.com/pkrog/biodbLipidmaps/issues
See More
Suggests BiocStyle, lgr, roxygen2, devtools, testthat (>= 2.0.0), knitr, rmarkdown, covr
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package biodbLipidmaps_1.8.0.tar.gz
Windows Binary biodbLipidmaps_1.8.0.zip
macOS Binary (x86_64) biodbLipidmaps_1.8.0.tgz
macOS Binary (arm64) biodbLipidmaps_1.8.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/biodbLipidmaps
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/biodbLipidmaps
Bioc Package Browser https://code.bioconductor.org/browse/biodbLipidmaps/
Package Short Url https://bioconductor.org/packages/biodbLipidmaps/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.18 Source Archive