Welcome to the new bioconductor.org!


Analyze flow cytometric data using histogram information

Bioconductor version: Release (3.18)

A package to analyze flow cytometric data of complex microbial communities based on histogram images

Author: Joachim Schumann <joachim.schumann at ufz.de>, Christin Koch <christin.koch at ufz.de>, Ingo Fetzer <info.fetzer at stockholmresilience.su.se>, Susann Müller <susann.mueller at ufz.de>

Maintainer: Author: Joachim Schumann <joachim.schumann at ufz.de>

Citation (from within R, enter citation("flowCHIC")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Analyze flow cytometric data using histogram information PDF R Script
Reference Manual PDF


biocViews CellBasedAssays, Clustering, FlowCytometry, ImmunoOncology, Software, Visualization
Version 1.36.0
In Bioconductor since BioC 3.0 (R-3.1) (9.5 years)
License GPL-2
Depends R (>= 3.1.0)
Imports methods, flowCore, EBImage, vegan, hexbin, ggplot2, grid
System Requirements
URL http://www.ufz.de/index.php?en=16773
See More
Linking To
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowCHIC_1.36.0.tar.gz
Windows Binary flowCHIC_1.36.0.zip (64-bit only)
macOS Binary (x86_64) flowCHIC_1.36.0.tgz
macOS Binary (arm64) flowCHIC_1.36.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowCHIC
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowCHIC
Bioc Package Browser https://code.bioconductor.org/browse/flowCHIC/
Package Short Url https://bioconductor.org/packages/flowCHIC/
Package Downloads Report Download Stats