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genoCN

genotyping and copy number study tools


Bioconductor version: Release (3.18)

Simultaneous identification of copy number states and genotype calls for regions of either copy number variations or copy number aberrations

Author: Wei Sun and ZhengZheng Tang

Maintainer: Wei Sun <wsun at bios.unc.edu>

Citation (from within R, enter citation("genoCN")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("genoCN")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genoCN")
add stuff PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews Genetics, Microarray, Software
Version 1.54.0
In Bioconductor since BioC 2.6 (R-2.11) (14 years)
License GPL (>=2)
Depends
Imports graphics, stats, utils
System Requirements
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package genoCN_1.54.0.tar.gz
Windows Binary genoCN_1.54.0.zip
macOS Binary (x86_64) genoCN_1.54.0.tgz
macOS Binary (arm64) genoCN_1.54.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/genoCN
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/genoCN
Bioc Package Browser https://code.bioconductor.org/browse/genoCN/
Package Short Url https://bioconductor.org/packages/genoCN/
Package Downloads Report Download Stats