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rmelting

R Interface to MELTING 5


Bioconductor version: Release (3.18)

R interface to the MELTING 5 program (https://www.ebi.ac.uk/biomodels/tools/melting/) to compute melting temperatures of nucleic acid duplexes along with other thermodynamic parameters.

Author: J. Aravind [aut, cre] , G. K. Krishna [aut], Bob Rudis [ctb] (melting5jars), Nicolas Le Novère [ctb] (MELTING 5 Java Library), Marine Dumousseau [ctb] (MELTING 5 Java Library), William John Gowers [ctb] (MELTING 5 Java Library)

Maintainer: J. Aravind <j.aravind at icar.gov.in>

Citation (from within R, enter citation("rmelting")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("rmelting")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("rmelting")
Tutorial PDF
Reference Manual PDF
NEWS Text

Details

biocViews BiomedicalInformatics, Cheminformatics, Software
Version 1.18.0
In Bioconductor since BioC 3.9 (R-3.6) (5 years)
License GPL-2 | GPL-3
Depends R (>= 3.6)
Imports Rdpack, rJava (>= 0.9-8)
System Requirements Java
URL https://github.com/aravind-j/rmelting https://aravind-j.github.io/rmelting/
Bug Reports https://github.com/aravind-j/rmelting/issues
See More
Suggests readxl, knitr, rmarkdown, reshape2, pander, testthat
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package rmelting_1.18.0.tar.gz
Windows Binary rmelting_1.18.0.zip
macOS Binary (x86_64) rmelting_1.18.0.tgz
macOS Binary (arm64) rmelting_1.18.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/rmelting
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/rmelting
Bioc Package Browser https://code.bioconductor.org/browse/rmelting/
Package Short Url https://bioconductor.org/packages/rmelting/
Package Downloads Report Download Stats