HelloRangesData
Data for the HelloRanges tutorial vignette
Bioconductor version: Release (3.19)
Provides the data that were used in the bedtools tutorial by Aaron Quinlan (http://quinlanlab.org/tutorials/bedtools/bedtools.html). Includes a subset of the DnaseI hypersensitivity data from "Maurano et al. Systematic Localization of Common Disease-Associated Variation in Regulatory DNA. Science. 2012. Vol. 337 no. 6099 pp. 1190-1195." The rest of the tracks were originally downloaded from the UCSC table browser. See the HelloRanges vignette for a port of the bedtools tutorial to R.
Author: Michael Lawrence
Maintainer: Michael Lawrence <michafla at gene.com>
citation("HelloRangesData")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HelloRangesData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HelloRangesData")
HelloRanges Example Data | R Script | |
Reference Manual |
Details
biocViews | ExperimentData, SequencingData |
Version | 1.30.0 |
License | GPL (>= 2) |
Depends | |
Imports | |
System Requirements | |
URL |
See More
Suggests | BiocStyle |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | HelloRanges, plyranges |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | HelloRangesData_1.30.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/HelloRangesData |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/HelloRangesData |
Package Short Url | https://bioconductor.org/packages/HelloRangesData/ |
Package Downloads Report | Download Stats |