HiCDataHumanIMR90
Human IMR90 Fibroblast HiC data from Dixon et al. 2012
Bioconductor version: Release (3.19)
The HiC data from Human Fibroblast IMR90 cell line (HindIII restriction) was retrieved from the GEO website, accession number GSE35156 (http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE35156). The raw reads were processed as explained in Dixon et al. (Nature 2012).
Author: Nicolas Servant
Maintainer: Nicolas Servant <Nicolas.Servant at curie.fr>
citation("HiCDataHumanIMR90")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("HiCDataHumanIMR90")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("HiCDataHumanIMR90")
HiC Data Human Fibroblast Dixon et al. 2012 | R Script | |
Reference Manual |
Details
biocViews | ExperimentData, GEO, Genome, Homo_sapiens_Data |
Version | 1.24.0 |
License | GPL-3 |
Depends | R (>= 3.5.0) |
Imports | |
System Requirements | |
URL |
See More
Suggests | HiTC, BiocStyle |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | HiTC |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | HiCDataHumanIMR90_1.24.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/HiCDataHumanIMR90 |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/HiCDataHumanIMR90 |
Package Short Url | https://bioconductor.org/packages/HiCDataHumanIMR90/ |
Package Downloads Report | Download Stats |