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JASPAR2016

Data package for JASPAR 2016


Bioconductor version: Release (3.18)

Data package for JASPAR 2016. To search this databases, please use the package TFBSTools (>= 1.8.1).

Author: Ge Tan <ge_tan at live.com>

Maintainer: Ge Tan <ge_tan at live.com>

Citation (from within R, enter citation("JASPAR2016")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("JASPAR2016")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews ExperimentData, GeneRegulation, MotifAnnotation
Version 1.30.0
License GPL-2
Depends R (>= 3.2.2), methods
Imports
System Requirements
URL http://jaspar.genereg.net/
See More
Suggests
Linking To
Enhances
Depends On Me
Imports Me ATACCoGAPS
Suggests Me CAGEWorkflow, chromVAR, TFBSTools
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package JASPAR2016_1.30.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/JASPAR2016
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/JASPAR2016
Package Short Url https://bioconductor.org/packages/JASPAR2016/
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