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antiProfilesData

Normal colon and cancer preprocessed affy data for antiProfile building.


Bioconductor version: Release (3.18)

Colon normal tissue and cancer samples used in Corrada Bravo, et al. gene expression anti-profiles paper: BMC Bioinformatics 2012, 13:272 doi:10.1186/1471-2105-13-272. Measurements are z-scores obtained from the GeneExpression Barcode in the 'frma' package

Author: Hector Corrada Bravo, Matthew McCall and Rafael A. Irizarry

Maintainer: Hector Corrada Bravo <hcorrada at gmail.com>

Citation (from within R, enter citation("antiProfilesData")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("antiProfilesData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews CancerData, ColonCancerData, ExperimentData, MicroarrayData, Tissue
Version 1.38.0
License Artistic-2.0
Depends Biobase
Imports
System Requirements
URL
See More
Suggests frma, GEOquery, GEOmetadb
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me antiProfiles, epivizr, epivizrChart, messina
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package antiProfilesData_1.38.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/antiProfilesData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/antiProfilesData
Package Short Url https://bioconductor.org/packages/antiProfilesData/
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