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The ewceData package provides reference data required for ewce

Bioconductor version: Release (3.19)

This package provides reference data required for ewce. Expression Weighted Celltype Enrichment (EWCE) is used to determine which cell types are enriched within gene lists. The package provides tools for testing enrichments within simple gene lists (such as human disease associated genes) and those resulting from differential expression studies. The package does not depend upon any particular Single Cell Transcriptome dataset and user defined datasets can be loaded in and used in the analyses.

Author: Alan Murphy [cre] , Nathan Skene [aut]

Maintainer: Alan Murphy <alanmurph94 at>

Citation (from within R, enter citation("ewceData")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Data package for Expression Weighted Celltype Enrichment EWCE HTML R Script
Reference Manual PDF


biocViews ExperimentData, ExperimentHub, ExpressionData, Genome, MicroarrayData, Proteome, RNASeqData, SequencingData, SingleCellData
Version 1.12.0
License Artistic-2.0
Depends R (>= 4.1), ExperimentHub
System Requirements
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Suggests knitr, BiocStyle, ggplot2, cowplot, rmarkdown, markdown, testthat (>= 3.0.0)
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Depends On Me
Imports Me EWCE
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Follow Installation instructions to use this package in your R session.

Source Package ewceData_1.12.0.tar.gz
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