KEGGREST
This is the development version of KEGGREST; for the stable release version, see KEGGREST.
Client-side REST access to the Kyoto Encyclopedia of Genes and Genomes (KEGG)
Bioconductor version: Development (3.20)
A package that provides a client interface to the Kyoto Encyclopedia of Genes and Genomes (KEGG) REST API. Only for academic use by academic users belonging to academic institutions (see
Author: Dan Tenenbaum [aut], Bioconductor Package Maintainer [aut, cre], Martin Morgan [ctb], Kozo Nishida [ctb], Marcel Ramos [ctb], Kristina Riemer [ctb], Lori Shepherd [ctb], Jeremy Volkening [ctb]
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
citation("KEGGREST")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("KEGGREST")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("KEGGREST")
Accessing the KEGG REST API | HTML | R Script |
Reference Manual | ||
NEWS | Text |
Details
biocViews | Annotation, KEGG, Pathways, Software, ThirdPartyClient |
Version | 1.45.1 |
In Bioconductor since | BioC 2.12 (R-3.0) (11.5 years) |
License | Artistic-2.0 |
Depends | R (>= 3.5.0) |
Imports | methods, httr, png, Biostrings |
System Requirements | |
URL | https://bioconductor.org/packages/KEGGREST |
Bug Reports | https://github.com/Bioconductor/KEGGREST/issues |
See More
Suggests | RUnit, BiocGenerics, BiocStyle, knitr, markdown |
Linking To | |
Enhances | |
Depends On Me | ROntoTools, Hiiragi2013 |
Imports Me | ADAM, adSplit, AnnotationDbi, attract, BiocSet, ChIPpeakAnno, CNEr, EnrichmentBrowser, famat, FELLA, funOmics, gage, ginmappeR, MetaboSignal, MWASTools, PADOG, pairkat, pathview, SBGNview, SMITE, transomics2cytoscape, YAPSA |
Suggests Me | Category, categoryCompare, gatom, GenomicRanges, globaltest, iSEEu, MLP, padma, rGREAT, RTopper, CALANGO, ggpicrust2, maGUI, phoenics, ReporterScore, scDiffCom |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | KEGGREST_1.45.1.tar.gz |
Windows Binary | KEGGREST_1.45.1.zip |
macOS Binary (x86_64) | KEGGREST_1.45.1.tgz |
macOS Binary (arm64) | KEGGREST_1.45.1.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/KEGGREST |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/KEGGREST |
Bioc Package Browser | https://code.bioconductor.org/browse/KEGGREST/ |
Package Short Url | https://bioconductor.org/packages/KEGGREST/ |
Package Downloads Report | Download Stats |