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flowMatch

This is the development version of flowMatch; for the stable release version, see flowMatch.

Matching and meta-clustering in flow cytometry


Bioconductor version: Development (3.19)

Matching cell populations and building meta-clusters and templates from a collection of FC samples.

Author: Ariful Azad

Maintainer: Ariful Azad <azad at lbl.gov>

Citation (from within R, enter citation("flowMatch")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("flowMatch")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowMatch")
flowMatch: Cell population matching and meta-clustering in Flow Cytometry PDF R Script
Reference Manual PDF

Details

biocViews Clustering, FlowCytometry, ImmunoOncology, Software
Version 1.39.0
In Bioconductor since BioC 2.14 (R-3.1) (10 years)
License Artistic-2.0
Depends R (>= 3.0.0), Rcpp (>= 0.11.0), methods, flowCore
Imports Biobase
System Requirements
URL
See More
Suggests healthyFlowData
Linking To Rcpp
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package flowMatch_1.39.0.tar.gz
Windows Binary flowMatch_1.39.0.zip
macOS Binary (x86_64) flowMatch_1.39.0.tgz
macOS Binary (arm64) flowMatch_1.39.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/flowMatch
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/flowMatch
Bioc Package Browser https://code.bioconductor.org/browse/flowMatch/
Package Short Url https://bioconductor.org/packages/flowMatch/
Package Downloads Report Download Stats