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This is the development version of highthroughputassays; for the stable release version, see highthroughputassays.

Using Bioconductor with High Throughput Assays

Bioconductor version: Development (3.19)

The workflow illustrates use of the flow cytometry packages to load, transform and visualize the flow data and gate certain populations in the dataset. The workflow loads the `flowCore`, `flowStats` and `flowWorkspace` packages and its dependencies. It loads the ITN data with 15 samples, each of which includes, in addition to FSC and SSC, 5 fluorescence channels: CD3, CD4, CD8, CD69 and HLADR.

Author: Bioconductor Package Maintainer [aut, cre]

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("highthroughputassays")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Using Bioconductor with High Throughput Assays HTML R Script


biocViews ImmunoOncologyWorkflow, ProteomicsWorkflow, Workflow
Version 1.27.0
License Artistic-2.0
Depends R (>= 3.3.0), flowCore, flowStats, flowWorkspace
System Requirements
URL https://www.bioconductor.org/help/workflows/highthroughputassays/
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Suggests knitr, rmarkdown, BiocStyle
Linking To
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package highthroughputassays_1.27.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/highthroughputassays
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/highthroughputassays
Package Short Url https://bioconductor.org/packages/highthroughputassays/
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