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Placental DNA methylation analysis tools

Bioconductor version: Release (3.18)

This package contains R functions to predict biological variables to from placnetal DNA methylation data generated from infinium arrays. This includes inferring ethnicity/ancestry, gestational age, and cell composition from placental DNA methylation array (450k/850k) data.

Author: Victor Yuan [aut, cre], Wendy P. Robinson [ctb]

Maintainer: Victor Yuan <victor.2wy at gmail.com>

Citation (from within R, enter citation("planet")):


To install this package, start R (version "4.3") and enter:

if (!require("BiocManager", quietly = TRUE))


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

planet HTML R Script
Reference Manual PDF


biocViews CpGIsland, DNAMethylation, DifferentialMethylation, Epigenetics, MethylationArray, Microarray, Software
Version 1.10.0
In Bioconductor since BioC 3.13 (R-4.1) (3 years)
License GPL-2
Depends R (>= 4.3)
Imports methods, tibble, magrittr, dplyr
System Requirements
URL https://victor.rbind.io/planet http://github.com/wvictor14/planet
Bug Reports http://github.com/wvictor14/planet/issues
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Suggests ggplot2, testthat, tidyr, scales, minfi, EpiDISH, knitr, rmarkdown
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Source Package planet_1.10.0.tar.gz
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